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Statistical analysis and machine learning algorithms for optical biopsy
Resource type
Authors/contributors
- Wu, Binlin (Author)
- Liu, Cheng-hui (Author)
- Boydston-White, Susie (Author)
- Beckman, Hugh (Author)
- Sriramoju, Vidyasagar (Author)
- Sordillo, Laura (Author)
- Zhang, Chunyuan (Author)
- Zhang, Lin (Author)
- Shi, Lingyan (Author)
- Smith, Jason (Author)
- Bailin, Jacob (Author)
- Alfano, Robert R. (Author)
Title
Statistical analysis and machine learning algorithms for optical biopsy
Abstract
Analyzing spectral or imaging data collected with various optical biopsy methods is often times difficult due to the complexity of the biological basis. Robust methods that can utilize the spectral or imaging data and detect the characteristic spectral or spatial signatures for different types of tissue is challenging but highly desired. In this study, we used various machine learning algorithms to analyze a spectral dataset acquired from human skin normal and cancerous tissue samples using resonance Raman spectroscopy with 532nm excitation. The algorithms including principal component analysis, nonnegative matrix factorization, and autoencoder artificial neural network are used to reduce dimension of the dataset and detect features. A support vector machine with a linear kernel is used to classify the normal tissue and cancerous tissue samples. The efficacies of the methods are compared.
Proceedings Title
Optical Biopsy XVI: Toward Real-Time Spectroscopic Imaging and Diagnosis
Conference Name
Optical Biopsy XVI: Toward Real-Time Spectroscopic Imaging and Diagnosis
Publisher
International Society for Optics and Photonics
Date
2018/02/19
Volume
10489
Pages
104890T
Citation Key
wuStatisticalAnalysisMachine2018
Accessed
12/24/19, 4:11 PM
Language
English
Library Catalog
Extra
1 citations (Crossref) [2023-10-31]
Citation Key Alias: lens.org/030-448-994-607-54X, pop00047
Citation
Wu, B., Liu, C., Boydston-White, S., Beckman, H., Sriramoju, V., Sordillo, L., Zhang, C., Zhang, L., Shi, L., Smith, J., Bailin, J., & Alfano, R. R. (2018). Statistical analysis and machine learning algorithms for optical biopsy. Optical Biopsy XVI: Toward Real-Time Spectroscopic Imaging and Diagnosis, 10489, 104890T. https://doi.org/10.1117/12.2288089
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