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Distinguish chromophobe renal cell carcinoma and renal oncocytoma based on analysis of multiphoton microscopic images using convolutional neural network

Resource type
Authors/contributors
Title
Distinguish chromophobe renal cell carcinoma and renal oncocytoma based on analysis of multiphoton microscopic images using convolutional neural network
Abstract
Convolutional neural networks (CNN) are a class of machine learning model that are especially well suited for imagebased tasks. In this study, we design and train a CNN on tissue samples imaged using Multi-Photon Microscopy (MPM) and show that the model can distinguish between chromophobe renal cell carcinoma (chRCC) and oncocytoma. We demonstrate the method to train a model using simple max-pooling vote fusion, and use the model to highlight regions of the input that cause a positive classification. The model can be tuned for higher sensitivity at the cost of specificity with a constant threshold and little impact to accuracy overall. Several numerical experiments were run to measure the model’s accuracy on both image and patient level analysis. Our models were designed with a dropout parameter that biases the model towards higher sensitivity or specificity. Our best performance model, as measured by area under the receiver operating characteristic curve (AUC of ROC, or AUROC) on patient level classification, is measured with a 94% AUROC and 88% accuracy, along with 100% sensitivity and 75% specificity.
Proceedings Title
Optical Biopsy XVII: Toward Real-Time Spectroscopic Imaging and Diagnosis
Conference Name
Optical Biopsy XVII: Toward Real-Time Spectroscopic Imaging and Diagnosis
Publisher
International Society for Optics and Photonics
Date
2019/03/04
Volume
10873
Pages
1087315
ISBN
16057422 (ISSN); 9781510623880 (ISBN)
Citation Key
icazaDistinguishChromophobeRenal2019
Accessed
12/17/19, 9:09 PM
Language
English
Library Catalog
Extra
0 citations (Crossref) [2023-10-31] Citation Key Alias: lens.org/082-242-611-443-764, pop00094
Citation
Icaza, M., Judd, N., Jain, M., Mukherjee, S., & Wu, B. (2019). Distinguish chromophobe renal cell carcinoma and renal oncocytoma based on analysis of multiphoton microscopic images using convolutional neural network. Optical Biopsy XVII: Toward Real-Time Spectroscopic Imaging and Diagnosis, 10873, 1087315. https://doi.org/10.1117/12.2509133