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A frameshift-generated cancer neoepitope that controls tumor burden in prophylaxis as well as therapy

Resource type
Authors/contributors
Title
A frameshift-generated cancer neoepitope that controls tumor burden in prophylaxis as well as therapy
Abstract
Insertion or deletion of one or two base pairs within a coding region causes a frameshift, which has the potential to generate neoepitopes (InDel-generated neoepitopes) that lack a self-counterpart and are entirely novel. Despite the obvious appeal of InDel-generated neoepitopes, and the demonstration of such candidate neoepitopes that can elicit a CD8 T-cell response, no InDel-generated neoepitopes that actually control tumors in vivo have been reported thus far. Here, in a mouse colon carcinoma line, we identify 11 InDels, only one of which generates a neoepitope that elicits tumor control in vivo in models of prophylaxis as well as therapy. Although this neoepitope has no self-counterpart, it has a low affinity (IC50 33,937.60 nM) for its MHC I allele. Despite its low affinity for MHC I, this neoepitope elicits antitumor activity in vivo through CD8 T cells. Furthermore, CD8 T cells elicited by this InDel-generated neoepitope, like the neoepitopes created by point mutations, show notably less exhaustion than classical immunogenic epitopes. Ironically, this InDel-generated neoepitope follows the same rules as noted for most of the tumor control-mediating neoepitopes generated by point mutations that have a poor affinity for MHC I alleles.
Publication
The Journal of Immunology
Publisher
American Association of Immunologists
Date
2025-04-10
Volume
214
Issue
6
Pages
1123-1132
Citation Key
georgeFrameshiftgeneratedCancerNeoepitope2025
ISSN
0022-1767
Language
en
Citation
George, M., Brennick, C., Hagymasi, A., Shcheglova, T., Al Seesi, S., Rosales, T., Baker, B., Măndoiu, I., & Srivastava, P. (2025). A frameshift-generated cancer neoepitope that controls tumor burden in prophylaxis as well as therapy. The Journal of Immunology, 214(6), 1123–1132. https://doi.org/10.1093/jimmun/vkaf016
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